Heatmap: Cluster_811 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
Bra016800 (PREP1)
- - - - -4.58 -4.3 -0.58 0.38 -0.93 -0.25 - 1.1 -0.57 -0.92 0.6 -1.81 -0.14 0.26 -2.91 -0.76 -0.9 -1.05 1.44 1.13 1.25 0.71 0.86 1.17 0.91 0.57 1.16
Bra039764 (ORP1C)
-6.2 - -7.7 - -5.36 -5.94 -2.4 -2.36 -1.3 -0.58 -7.64 0.88 -1.61 0.22 1.01 -1.22 -0.67 0.35 -5.66 -0.58 -1.33 -0.64 0.53 1.25 1.32 1.15 1.07 1.43 1.4 1.09 0.98

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.