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Heatmap: Cluster_542 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
Bra002635 (MAP3K13)
 -1.24 -1.47 -3.12 -3.67 -0.61 0.1 -0.82 -1.84 0.33 -0.47 -1.04 -0.64 -1.06 0.14 0.36 0.58 -0.23 2.36 -0.36 -0.1 -0.31 -1.28 0.02 -0.48 0.49 -0.66 0.29 0.84 1.43 -1.01 0.13
Bra032852 (PUB45)
 -2.11 -2.23 -3.09 -3.53 -0.91 0.66 -1.01 -1.44 -0.92 -1.53 -0.67 -0.23 -0.56 0.89 0.41 -0.02 -1.04 2.36 -0.33 -0.63 -1.14 -0.75 0.79 0.24 0.28 -0.42 0.08 0.86 0.88 0.24 0.37

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.