Heatmap: Cluster_606 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
Bra033327 (ATATH8)
-0.66 -0.24 -3.23 -0.97 0.19 -0.01 -0.38 -1.87 -2.15 0.9 -0.47 0.27 0.38 -1.19 1.28 0.64 0.49 1.18 1.1 0.77 -0.15 1.13 0.0 -3.45 -1.2 0.38 -1.15 -0.29 -0.7 -1.22 -2.2
-0.12 0.22 -1.2 -0.01 -1.34 1.16 0.57 -1.23 0.32 -2.39 -2.49 0.13 -0.33 -1.86 0.59 1.83 -1.16 2.12 0.96 0.67 0.13 1.51 - - -0.59 -0.89 - - -1.28 - -2.17

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.