1. Home
  2. Tools
  3. Expression Heatmap
  4. Results

Heatmap: Cluster_724 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

 Transpose table  Download table
Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
Bra007736 (MARD1)
 -1.27 -1.04 0.2 -0.93 0.95 -0.14 -1.31 -0.78 0.6 -0.1 0.49 0.08 0.15 0.32 0.83 0.17 -0.45 0.72 0.09 0.07 -0.14 -0.02 0.88 -0.38 -0.53 -0.42 -0.87 -1.31 -0.02 0.02 0.06
Bra012358 (PIN7)
 -1.25 -1.57 -0.54 -2.05 0.91 -0.37 -0.9 -0.84 0.34 0.24 0.26 -0.29 0.09 0.41 0.52 0.89 -0.64 0.81 0.33 -0.4 0.28 -0.25 0.51 0.13 0.12 -0.36 -0.3 0.09 0.19 0.06 -1.0

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.