Heatmap: Cluster_854 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
Bra006422 (BRAVO)
- 1.9 - -0.94 0.24 - 0.46 -1.12 -1.27 1.65 - - 1.4 - -1.08 -0.1 - 2.14 -0.22 - 0.27 - 0.98 -0.36 -0.39 0.23 - 0.45 1.65 - -1.1
- 1.11 -0.75 0.87 -0.69 0.03 -0.35 -1.58 -0.46 -0.87 0.14 -0.72 -0.76 -0.78 -1.12 0.26 -0.88 1.01 1.19 -2.84 -1.89 0.52 1.35 0.05 0.37 0.87 -2.7 -0.43 -0.24 -0.56 1.03

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.