Heatmap: Cluster_595 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
0.78 0.3 1.74 2.0 -1.0 1.41 0.97 - 1.03 -1.95 - - -0.2 0.46 -0.25 - 0.65 -1.62 -0.07 -0.88 -0.33 0.91 0.36 -0.74 -1.12 - -1.56 -2.34 -0.81 - -0.58
0.62 0.74 1.01 1.11 -0.08 1.2 0.8 -2.63 0.81 -0.55 -2.48 -2.63 0.63 1.47 0.24 -2.27 0.2 -0.37 -0.12 -0.09 0.43 1.1 -1.62 -2.88 -1.4 -1.74 -2.14 -1.77 -1.46 -1.61 -1.35

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.