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Heatmap: Cluster_484 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
1.53 -0.21 0.17 -0.31 1.34 0.6 -4.18 -4.32 -2.94 -3.59 -3.73 -0.13 -3.91 -2.82 0.29 -3.25 -0.52 -3.85 -3.55 -3.6 -0.94 -3.8 -0.45 0.67 0.84 0.89 1.0 1.09 1.13 1.13 1.28
0.06 0.67 0.69 0.23 0.84 -0.93 -1.13 -0.57 -1.04 -0.09 -0.58 -0.43 -0.46 -0.18 -0.99 -0.78 -0.78 -1.29 -1.53 -0.61 -1.5 -0.4 0.77 0.23 0.11 0.86 0.54 -0.05 0.44 0.81 1.13
Bra034613 (VHA-H)
 -0.07 0.12 0.47 0.15 0.44 -0.15 -0.89 -0.77 -0.38 -0.09 -0.43 0.04 -0.11 0.8 0.17 -0.36 -0.24 -1.04 -0.41 -0.54 -0.95 -0.3 -0.01 0.29 0.23 0.27 0.2 0.11 0.47 0.48 0.43

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.