Heatmap: Cluster_881 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
Bra017351 (AOC2)
-3.15 -1.12 - -1.32 -1.96 -0.44 0.07 -1.05 0.09 -0.95 -1.54 -3.05 0.62 0.55 1.51 -0.9 -0.91 2.31 -1.97 -1.35 -0.25 -1.72 1.72 0.26 -0.31 -1.4 -0.57 -3.23 -1.98 -1.54 2.24
Bra038787 (GALT2)
-1.67 -2.17 -4.06 - -1.19 -0.74 0.26 -1.31 -0.1 -0.71 -1.92 0.03 -3.0 0.22 1.94 0.63 -1.6 1.79 -0.48 -0.79 -0.94 -0.36 1.42 -0.29 -0.59 - -0.64 -2.39 -2.28 0.7 2.34

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.