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Heatmap: Cluster_930 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
Bra014522 (ATG4B)
 -0.16 -0.08 -0.23 -0.66 0.71 0.6 -0.67 -1.14 0.1 -0.07 -0.05 -0.05 0.17 1.08 0.61 0.3 -0.02 0.71 -0.34 -0.14 -0.31 -0.37 0.33 -0.43 -0.4 -0.47 -0.36 -0.3 -0.05 -0.25 -0.48
Bra014523 (GDI2)
 0.04 0.1 -0.11 -0.31 0.52 0.41 -0.58 -0.8 -0.08 -0.3 -0.12 0.01 0.06 0.88 0.78 0.42 -0.05 0.1 0.1 -0.11 -0.34 -0.24 0.43 -0.29 -0.26 -0.44 -0.3 -0.24 -0.19 -0.35 -0.31
Bra021864 (CHB2)
 -0.27 -0.08 -0.11 -0.23 0.55 0.49 -0.35 -0.4 -0.07 -0.16 -0.08 -0.23 0.25 0.79 0.58 0.34 -0.27 0.24 -0.02 -0.04 -0.13 -0.27 0.3 -0.33 -0.23 -0.42 -0.17 -0.29 0.03 -0.47 -0.13

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.