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Heatmap: Cluster_707 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
Bra003978 (NRT1.7)
 0.37 0.69 1.08 0.51 0.25 0.21 -1.28 -0.43 -0.76 -0.77 -0.44 -0.77 -0.49 -0.6 -1.43 0.54 0.07 -2.47 -0.46 -0.31 0.58 -0.49 0.36 0.37 0.28 0.08 0.14 -0.03 -0.86 0.07 0.91
Bra003979 (NRT1.7)
 0.46 0.46 1.21 0.43 0.42 0.83 -0.56 -0.29 -0.49 0.25 -0.83 -1.4 -0.09 -0.7 -1.14 -0.06 0.26 -1.77 0.07 -0.5 0.6 -0.76 0.13 -0.05 -0.16 -0.57 -0.03 -0.29 -0.94 0.2 0.78

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.