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Heatmap: Cluster_509 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
Bra000737 (TUF)
 -0.15 -0.02 -0.2 -0.13 -0.48 -0.35 0.17 0.31 -0.33 0.04 0.3 -0.16 1.0 -0.01 0.14 0.11 0.25 1.19 -0.15 -0.19 -0.44 -0.28 -0.78 -0.74 -0.67 -0.67 -0.77 -0.29 -0.38 0.28 0.76
Bra011310 (GYM)
 - - - - - - - - - - - - 3.72 - - - - 2.2 - - - - - - - - - - - 2.06 3.19
Bra035547 (MYB120)
 - - - - - - 0.81 - -1.11 - -0.92 - 3.43 - - 1.22 - 0.26 - - - - -0.99 1.35 - 0.99 -0.0 -0.73 0.74 0.7 2.0

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.