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Heatmap: Cluster_536 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
Bra002246 (GEF10)
 -0.87 -3.32 -1.79 -4.28 1.87 1.21 0.57 -0.91 -0.68 -0.96 -0.94 1.11 -0.4 -0.19 0.06 1.22 0.83 0.2 0.42 0.69 0.6 0.11 -4.29 -1.34 -0.88 -1.81 -1.3 -0.76 0.28 -0.74 -0.64
-0.59 -3.29 -2.45 -5.63 1.89 0.99 0.68 -1.71 0.67 -0.6 0.43 0.65 -1.63 0.79 0.04 0.26 0.19 -1.49 0.63 0.62 0.97 -0.15 - -0.1 -0.08 -0.56 -0.76 -1.29 -1.13 -0.94 0.01
-0.76 -4.95 -3.34 -5.12 1.32 0.91 0.5 -0.17 1.02 0.35 0.0 0.83 -2.63 1.34 -0.08 0.33 0.26 -3.79 0.53 0.44 0.95 0.69 -5.31 -0.39 -0.7 -1.24 -1.16 -0.36 -0.58 -1.14 -0.35

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.