Heatmap: Cluster_918 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
Bra021072 (FIP2)
1.03 2.16 1.33 -0.11 1.5 1.36 -1.78 - -0.67 -1.74 -1.97 -1.93 -1.46 -0.02 0.39 -0.42 -2.37 -0.72 -0.95 - -1.34 -1.3 2.41 -1.1 -1.81 -2.15 -1.99 -1.42 -1.07 -0.54 -1.67
Bra032433 (ERF59)
0.79 2.19 1.57 -0.83 1.97 -0.23 - -4.14 -0.44 -0.86 -1.89 -1.56 -3.21 - - - - 0.24 1.09 -0.86 -0.26 -0.16 2.86 - -1.82 - -3.4 -1.8 -2.58 -1.12 -2.6

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.