Heatmap: Cluster_657 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
Bra024935 (CYS5)
-2.09 -0.12 -0.39 -0.32 -1.14 -1.07 -0.56 -0.75 -0.06 0.4 -1.2 0.01 1.64 -1.34 -0.77 0.36 1.14 1.87 0.44 -0.38 -0.35 0.25 1.48 -0.43 -0.87 -0.44 -0.32 -2.09 -1.66 -1.71 -0.91
-1.17 -0.29 0.19 0.11 -0.11 -0.12 0.22 0.23 -0.98 -0.2 -0.18 -0.24 1.12 -0.38 -0.6 -0.12 0.55 1.77 0.23 0.14 0.25 0.52 0.42 -0.93 -0.75 -0.52 -0.45 -1.48 -1.75 -0.84 -0.27

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.