Heatmap: Cluster_357 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
-2.33 - - -1.72 0.46 0.54 -0.0 -0.76 -1.06 -1.23 -1.1 0.02 -1.54 1.16 0.21 -1.53 0.64 -0.43 -0.37 - -2.69 - 2.18 -0.24 0.61 0.05 0.07 1.0 0.93 1.09 0.44
-2.59 -3.53 -2.84 -1.66 -1.26 0.9 -1.29 -3.07 -2.04 -0.52 -1.68 -2.24 -1.34 1.81 -0.51 -0.83 - 0.39 -0.33 -0.63 -1.31 -3.96 2.2 0.68 0.43 -0.4 -0.03 1.11 1.18 0.67 1.23

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.