Heatmap: Cluster_797 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
Bra000342 (KMD3)
-0.62 0.58 0.72 0.49 -0.03 -1.4 -0.07 0.45 0.19 0.19 0.25 -0.29 -0.31 -0.52 0.03 -0.76 -1.41 0.11 -0.92 -0.23 -1.11 -0.31 1.56 -1.3 -0.7 1.14 -0.97 -0.5 -0.07 0.55 -0.29
Bra033489 (NDR1)
0.02 0.19 0.12 0.36 -0.09 -0.39 -0.12 0.17 -0.23 0.07 0.05 0.11 -0.15 -0.37 -0.2 -0.2 -0.18 0.22 -0.31 -0.14 -0.3 -0.16 0.55 -0.12 -0.12 0.56 -0.07 -0.13 -0.13 0.37 -0.03

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.