Heatmap: Cluster_338 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
-1.66 -2.67 -3.15 -1.58 -0.11 0.11 0.53 -0.78 -1.14 -2.71 -0.78 -2.99 0.25 -0.67 -1.61 0.02 -0.52 -2.82 -1.69 -0.98 -1.35 -0.32 0.77 1.23 1.28 1.19 1.24 1.22 0.92 0.48 0.99
Bra030617 (5PTase14)
-1.45 -1.74 -0.54 -2.85 0.82 -0.24 0.53 -1.23 -1.32 -1.02 -0.6 -0.85 -1.77 -0.11 0.04 -0.05 -0.55 -1.6 -0.08 -0.29 -0.67 -0.63 0.41 1.13 0.91 0.8 0.85 0.97 0.91 0.24 0.78

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.