Heatmap: Cluster_627 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
Bra014709 (LDW1)
- 0.05 -2.0 -0.96 -3.17 0.21 -0.24 -0.09 -1.76 -0.16 0.89 -1.41 0.42 1.12 0.57 0.84 0.47 0.15 -3.1 0.38 0.28 -0.11 -0.54 -0.17 -0.86 -0.69 -0.57 0.1 0.81 0.75 0.97
Bra018706 (AXR6)
-0.73 0.62 - -3.62 -1.18 -0.43 -0.48 -0.29 -0.19 0.05 -0.64 0.34 0.26 0.28 0.46 -0.2 -0.04 -0.75 -0.43 0.77 0.14 -0.19 1.07 0.08 0.38 -0.3 0.19 0.48 0.82 -0.38 0.32

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.