Heatmap: Cluster_961 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
Bra034659 (A/N-InvB)
-0.71 -1.17 -1.63 -0.86 0.53 0.71 -0.32 -0.17 0.04 -0.1 0.02 -0.89 0.09 1.0 1.25 0.3 0.19 0.03 0.44 -0.61 -0.57 -0.65 -0.76 -1.29 -1.01 -0.87 -0.76 0.0 0.12 0.63 1.24
Bra034661 (A/N-InvB)
-0.71 -1.17 -1.63 -0.86 0.53 0.71 -0.32 -0.17 0.04 -0.1 0.02 -0.89 0.09 1.0 1.25 0.3 0.19 0.03 0.44 -0.61 -0.57 -0.65 -0.76 -1.29 -1.01 -0.87 -0.76 0.0 0.12 0.63 1.24

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.