Heatmap: Cluster_836 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
Bra001284 (MYB83)
- - -2.69 -2.36 -0.53 -0.32 0.01 -0.67 -0.26 -0.37 -0.09 -0.52 1.25 0.51 0.43 0.9 0.88 1.01 0.12 -0.54 -0.08 0.0 1.37 0.4 -0.73 -1.61 0.45 -0.36 -2.03 -1.1 0.99
Bra007732 (FAP1)
- - - -2.32 0.45 -0.74 0.79 -2.89 -0.13 -0.74 -0.04 -2.79 1.8 0.22 0.69 0.57 1.65 1.52 0.28 -0.51 -0.13 0.2 0.82 -0.43 -1.63 0.64 -0.95 -1.53 -0.62 - -0.54

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.