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Heatmap: Cluster_896 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
Bra023140 (DIS2)
 0.31 0.08 0.12 -0.15 -0.01 0.05 -0.2 -0.14 0.01 -0.21 -0.14 -0.13 0.22 0.21 0.51 0.07 0.05 0.01 -0.19 -0.03 -0.44 -0.03 0.02 -0.13 0.07 -0.54 0.06 -0.14 0.0 0.25 0.02
Bra030789 (GXM1)
 0.67 0.37 -0.93 -1.12 1.05 0.07 -0.86 -1.14 -1.18 -0.82 0.61 -0.71 -0.06 0.95 0.96 -0.2 -0.44 -0.23 0.27 0.18 -0.83 -0.61 0.51 -0.37 0.79 -0.43 -0.03 -0.87 -0.91 0.25 0.13

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.