Heatmap: Cluster_777 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
Bra001672 (CHX19)
0.76 -0.43 -1.26 0.52 0.77 0.55 0.17 0.0 -0.86 -0.8 -2.15 -0.94 -1.14 0.57 0.23 0.45 0.36 0.05 -0.68 -0.97 0.33 -0.06 1.71 -0.92 -0.02 -0.3 -0.4 -0.1 -0.59 -0.66 -0.32
Bra021259 (RBL14)
0.17 -0.24 -0.84 -0.0 0.65 1.42 0.4 -0.6 -1.2 -0.98 -0.94 -1.0 -1.28 0.78 0.14 0.62 0.86 0.28 -0.29 -1.14 -0.23 0.11 1.81 -0.81 -0.77 -0.91 -0.84 -0.63 -0.36 -1.21 -0.54

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.