Heatmap: Cluster_672 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
Bra001403 (OFP8)
0.25 1.71 0.51 0.25 0.5 -0.68 -1.75 -0.16 -1.79 -0.66 - - 1.73 -1.18 - 0.69 -0.15 0.59 2.11 - 0.88 - 0.24 - -0.43 - - -0.27 -0.43 1.01 -1.55
Bra025738 (KCS4)
-0.08 0.49 0.59 0.09 -0.33 -0.87 -0.39 -0.52 0.35 0.02 -0.45 0.26 0.6 0.3 0.45 0.68 -0.25 -0.27 0.47 0.06 0.04 0.05 0.3 -0.26 -0.32 -0.49 -0.61 -0.6 -0.42 -0.09 -0.77

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.