Heatmap: Cluster_733 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
Bra016198 (RAY1)
-1.57 -0.83 -1.12 -1.45 0.28 0.19 -0.13 -0.37 -0.27 0.19 -0.0 -0.45 -0.02 0.72 0.97 0.81 0.29 0.58 -0.02 0.36 0.02 0.12 1.41 -0.41 -0.58 -1.15 -0.23 -0.65 -1.01 -0.56 -0.13
Bra016512 (GLZ1)
-0.61 -0.5 -0.76 -0.62 0.29 -0.18 -0.72 -1.07 0.12 0.43 -0.18 -0.07 -0.06 0.53 0.92 0.2 -0.04 0.44 0.36 0.39 -0.16 -0.13 1.07 -0.31 -0.36 -0.19 -0.31 -0.49 -0.33 0.01 -0.19
Bra021504 (PRA8)
-1.27 -0.13 -0.35 -1.41 0.01 -0.05 -0.38 -0.63 -0.02 0.31 -0.05 -0.58 -0.45 1.01 1.11 0.56 0.37 0.57 -0.28 0.14 0.11 0.2 1.35 -0.8 -0.74 -0.03 -0.8 -0.64 -0.26 -0.39 -1.21
Bra030783 (MYB61)
-3.79 - - - -0.06 -0.37 -2.41 -1.39 0.25 0.51 -0.97 0.64 -0.03 0.69 0.95 0.35 0.63 1.42 0.9 0.69 -1.45 -0.77 2.28 -0.3 0.54 -1.56 -0.69 -0.97 -1.47 -1.32 -2.95

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.