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Heatmap: Cluster_424 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
- - 1.8 - 0.17 - 0.07 0.59 -1.03 - -1.04 0.17 1.32 - - - - -0.93 -0.93 - - -1.0 3.45 - - 0.17 - - 0.94 0.84 0.97
Bra022041 (ACD11)
 - - 3.04 - - - - - - -0.12 -2.95 -0.8 -2.58 - -0.78 -1.61 -2.65 0.68 - - - -1.35 4.16 - - - - - - - -
Bra033456 (SWC2)
 - 1.8 2.4 - -0.04 - 0.72 - - -0.27 0.62 - - 0.17 - - - - - - - 2.07 3.58 - - - - - - - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.