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Heatmap: Cluster_431 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
Bra020281 (GASA10)
 -0.98 -0.46 -1.88 -0.8 -1.28 -1.93 0.04 0.53 0.66 0.67 -0.22 -0.3 -0.01 0.32 0.42 0.1 0.06 1.22 0.34 0.03 -0.2 -0.13 -1.13 0.32 -0.05 -0.03 0.59 -0.91 0.07 0.22 -0.08
Bra020282 (AtRabE1b)
 -0.96 -1.11 -1.17 -1.11 -0.83 -0.18 -0.26 -0.15 0.28 0.4 0.43 0.21 0.04 0.85 -0.23 0.0 0.17 0.18 0.22 -0.16 0.12 0.12 -0.55 0.25 0.18 -0.07 0.21 0.38 0.38 0.07 -0.05
Bra025831 (CYCB2;3)
 -0.06 -0.82 -0.35 -0.88 -0.68 -0.35 -0.34 -0.34 0.45 0.0 0.08 0.18 -0.2 0.53 0.14 0.25 -0.51 0.79 0.59 -0.08 -0.44 -0.28 -0.52 0.02 0.08 -0.07 0.04 0.3 0.39 0.35 -0.01

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.