Heatmap: Cluster_860 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view zlog-transformed or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Showing raw values)

Transpose table Download table

Gene	Light: 268 uE m-2 s-1	Light: 202.5 uE m-2 s-1 (Control)	Light: 135 uE m-2 s-1	Light: 67.5 uE m-2 s-1	Photoperiod: L24	Photoperiod: L20D4 (Control)	Photoperiod: L12D12	Photoperiod: L8D16	RBW: 4:1:1 (Control)	RBW: 4:1:0	RBW: 3:1:1	RBW: 3:1:0	Nitrogen: 0%	Nitrogen: 25%	Nitrogen: 50%	Nitrogen: 100% (Control)	Nitrogen: 150%	Phosphorous: 0%	Phosphorous: 25%	Phosphorous: 50%	Phosphorous: 100% (Control)	Phosphorous: 150%	Potassium: 0%	Potassium: 25%	Potassium: 50%	Potassium: 100% (Control)	Potassium: 150%	Temperature: 20°C	Temperature: 25°C (Control)	Temperature: 30°C	Temperature: 35°C
Bra006865 (PFN3)	8.61	0.0	0.08	0.06	14.64	34.92	40.86	18.52	43.22	25.52	11.99	27.46	48.36	70.72	116.01	107.07	108.94	64.98	70.37	52.2	34.81	31.13	41.32	68.45	61.36	56.47	67.29	42.83	40.45	36.86	79.56
Bra010358 (NPGR2)	0.63	0.83	0.56	0.67	0.87	1.13	1.04	1.01	1.36	1.34	1.25	1.06	0.96	1.63	2.44	1.72	1.85	2.75	1.96	1.17	1.14	1.12	1.04	1.91	1.69	1.36	1.56	1.22	1.72	1.23	1.36
Bra017374 (NET1C)	0.05	0.08	0.14	0.14	0.52	0.5	0.21	0.19	0.3	0.19	0.36	0.4	0.23	0.49	1.08	0.24	0.38	0.51	0.35	0.11	0.11	0.14	0.15	0.22	0.23	0.25	0.29	0.15	0.27	0.19	0.31
Bra021842 (RLP27)	0.96	2.42	1.03	2.21	1.12	4.32	1.44	4.86	2.96	1.9	2.42	7.02	2.24	3.9	3.95	5.92	7.82	1.26	8.37	2.6	5.0	3.01	7.46	7.17	7.82	6.51	7.98	5.83	8.99	7.72	6.14
Bra028933 (PSL4)	2.92	2.8	2.41	3.1	3.53	4.75	5.5	2.34	5.24	3.28	4.27	5.93	5.31	7.4	6.6	5.82	7.87	5.32	4.69	3.97	4.07	6.86	6.11	5.64	7.25	5.01	6.03	6.16	5.3	6.43	5.68
Bra032669 (EBS4)	4.2	3.43	4.6	3.85	6.72	8.27	3.96	5.02	7.16	6.34	6.23	5.87	6.25	6.88	10.3	5.64	5.23	9.62	5.14	5.34	4.61	4.32	3.79	5.96	6.15	5.21	6.27	6.24	6.12	5.48	6.56

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)