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Heatmap: Cluster_450 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
1.88 1.43 1.38 1.69 1.33 1.84 0.09 -6.07 0.77 -4.63 0.62 -0.4 -0.29 -5.19 -4.04 -0.47 0.56 -0.69 0.57 -3.65 -0.54 0.61 -5.68 -7.53 -7.79 -6.46 -6.75 -5.84 -5.62 -6.11 -7.62
1.93 1.53 1.35 1.85 1.28 1.84 -0.12 -5.06 0.81 -4.14 0.46 -0.28 -0.64 -4.13 -4.18 -1.01 0.43 -0.52 0.59 -4.16 -0.71 0.43 -4.03 -5.09 -5.5 -4.11 -5.22 -4.98 -4.4 -4.61 -5.95
Bra026656 (LUT2)
 1.28 0.93 -0.01 0.29 1.93 0.91 -0.97 -0.69 -0.1 0.09 0.68 -0.02 -0.35 0.35 0.69 0.31 0.96 -0.41 -0.54 0.48 -0.09 0.67 -2.28 -5.69 -0.73 - -7.76 -31.4 - - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.