Heatmap: Cluster_361 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
2.15 - - - - - - - - - - - - - - - - - - - - - 4.73 - - - - - - - -
Bra027356 (GLIP1)
2.31 1.44 - - 0.13 - - - - - - - 0.12 - - - - - - - - - 4.4 - - - - - - - -
Bra031350 (NRPD5)
0.37 -0.51 - -2.54 -0.8 -2.5 - - - - - - -0.69 -1.39 - -2.23 - - -0.73 - - - 4.21 1.25 0.38 -0.41 - -0.35 -0.02 0.15 -1.31
- - - - - - - - - - - - -0.08 - - - - -1.34 - - - - 4.44 - 1.04 1.03 - 1.56 -0.07 - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.