1. Home
  2. Tools
  3. Expression Heatmap
  4. Results

Heatmap: Cluster_476 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

 Transpose table  Download table
Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
0.29 0.04 0.63 -0.05 0.78 0.44 -1.06 -0.72 -0.17 -0.35 -0.52 -0.72 -0.5 0.18 0.63 -0.01 -0.72 0.57 -0.3 -0.2 -0.78 -0.15 0.46 -0.25 -0.18 -0.55 -0.12 0.09 0.21 0.42 0.28
Bra026688 (CAT8)
 -0.01 0.37 0.52 -0.42 0.73 0.52 -0.72 -0.64 -0.52 -0.08 -0.77 -0.43 -0.34 0.29 0.42 -0.1 -0.26 0.25 -0.13 -0.73 -0.39 -0.22 0.59 -0.14 -0.29 -0.26 -0.09 0.17 0.24 0.47 0.09
0.01 0.33 0.53 -0.07 0.49 0.25 -0.49 -0.32 -0.24 -0.17 -0.29 -0.25 -0.23 0.13 0.19 -0.05 -0.1 0.22 -0.22 -0.21 -0.39 -0.08 0.18 -0.01 -0.04 -0.12 -0.04 0.15 0.18 0.1 -0.07

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.