Heatmap: Cluster_602 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
Bra013648 (RHC1)
-0.57 0.2 -1.42 -1.56 -0.58 0.75 -0.45 0.97 0.2 0.95 0.52 0.75 0.79 -0.82 0.49 1.22 0.83 -0.23 -2.4 1.52 1.37 0.34 -2.97 -2.67 -2.73 -1.5 -2.64 -2.27 -2.65 -2.27 -2.7
-0.31 -0.05 0.22 -0.1 -1.5 -0.19 0.29 -0.18 0.2 0.49 0.58 0.65 0.54 -0.38 0.51 0.53 0.53 0.25 0.06 0.48 0.85 -0.21 -2.67 -0.67 -0.53 -0.22 -0.09 -1.77 -0.73 -1.32 -0.35

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.