Heatmap: Cluster_315 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
Bra005361 (NPSN11)
-0.83 -0.01 -0.84 -2.93 -0.01 -1.34 -1.05 -0.56 -0.44 0.66 -0.45 1.07 0.44 0.79 0.49 0.92 -0.14 -0.03 -0.71 -0.0 0.33 0.25 -0.67 0.82 0.99 -0.11 0.48 -0.33 -0.95 -1.49 -1.4
-3.99 -3.98 -0.63 -2.97 0.2 -0.61 -1.77 0.3 0.37 -0.08 0.17 -0.28 0.07 1.14 0.91 0.17 0.71 0.8 -1.92 -0.35 0.96 0.47 -1.04 0.28 0.89 -0.01 0.05 -1.25 -0.36 -0.18 -0.13

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.