Heatmap: Cluster_819 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
-0.42 -1.08 0.24 -0.41 0.22 -1.16 -1.08 0.07 -0.47 -0.85 -0.61 -0.94 2.12 -1.32 -0.88 -0.26 0.12 0.64 -0.55 -0.53 -1.09 -1.06 0.11 0.14 0.44 0.36 0.18 0.42 0.34 0.37 0.39
Bra035686 (RSW7)
-0.5 -1.4 -0.37 -0.82 -0.38 -1.19 -0.18 -0.02 0.42 0.12 -0.46 -0.17 1.63 -0.75 -1.31 0.39 0.13 0.62 -0.67 -0.38 -0.62 -0.54 0.26 0.01 0.05 0.16 0.11 0.47 0.24 0.21 0.61

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.