Heatmap: Cluster_855 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
Bra006435 (SAUR21)
-1.45 -0.84 -0.5 0.79 - -1.64 0.81 0.65 -0.42 0.29 0.42 0.76 - -0.14 - -0.39 0.37 -2.55 0.87 1.54 -0.81 -0.54 - 1.04 -0.35 -1.14 0.14 0.73 0.03 0.55 0.42
Bra007338 (CHR)
0.37 -0.61 1.23 0.34 - 0.15 0.88 0.26 -3.16 0.15 -0.83 -0.01 -0.78 -0.18 - -0.43 -0.47 -0.48 0.19 1.54 - -0.07 0.19 0.61 -1.18 0.87 0.8 0.32 -0.45 0.13 -2.86

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.