Heatmap: Cluster_529 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
Bra002134 (NCBP)
0.71 1.48 1.47 1.25 -0.09 0.97 -0.74 -0.19 0.23 0.9 -1.62 -0.9 0.35 1.12 0.83 -0.92 0.55 -0.65 -0.83 -0.71 -0.72 -0.23 -0.57 -1.44 -2.77 -1.58 -2.4 -1.61 -1.83 -3.48 -1.96
0.65 0.61 0.7 0.23 0.07 0.38 0.03 0.01 -0.59 0.03 -0.29 -0.4 -0.02 0.8 0.51 -0.06 0.56 -0.42 -0.16 -0.14 0.16 0.05 0.09 -0.36 -0.33 -0.71 -0.78 -0.68 -0.73 -1.35 -0.44

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.