Heatmap: Cluster_493 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
0.0 -1.99 -0.71 -0.83 0.12 0.78 -0.83 -2.67 0.19 -0.94 -0.64 0.25 -1.43 0.24 1.34 -0.92 -0.93 -0.01 -0.83 0.31 -0.0 -0.86 1.63 0.1 0.13 0.22 0.23 -0.1 0.33 0.33 0.02
Bra031881 (MRH3)
- - - - -0.41 -0.16 -2.28 -1.28 -0.11 -0.25 -1.82 -1.51 0.37 1.44 1.95 -0.9 -0.16 0.36 -1.29 - 0.72 0.32 1.97 1.14 0.64 - 0.38 0.05 -0.51 0.65 -2.52

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.