Heatmap: Cluster_387 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
Bra020361 (PLC1)
0.27 -0.5 -0.69 -1.01 1.54 1.14 -1.11 -0.05 0.19 0.1 -0.57 -0.74 -0.62 0.54 0.35 0.19 -0.19 -0.38 -0.74 0.5 -0.27 -0.48 -0.66 -0.16 -0.07 -0.17 -0.18 -0.06 0.11 -0.06 -0.08
Bra039416 (IMPA-7)
-0.05 -0.06 -0.32 -1.64 1.3 0.83 -1.05 -0.15 0.77 0.31 0.12 0.24 0.11 1.05 0.65 0.19 0.04 -0.19 -0.41 0.15 0.13 -0.73 -1.23 -0.61 -0.6 -2.15 -1.02 -0.07 -0.08 -0.69 -0.28

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.