Heatmap: Cluster_778 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
-0.94 -0.25 -0.06 -1.44 0.47 -0.07 -1.33 -0.14 0.26 -0.0 -0.27 -0.61 0.93 0.63 -0.47 -0.45 0.22 -0.67 -0.95 -0.44 0.14 0.18 1.37 -0.35 -0.67 -0.57 -0.72 -1.04 -0.07 0.53 1.39
Bra023733 (DAR4)
- 0.02 - 0.01 1.32 0.66 - - - - 0.5 - 0.85 - - 1.52 1.43 - - - 1.7 - 2.01 - - - -0.25 -0.03 -0.25 0.72 2.18

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.