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Heatmap: Cluster_470 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
Bra002780 (EMB1789)
 -0.41 0.17 -0.33 -3.07 1.21 -0.24 -0.91 -0.63 0.3 -0.53 0.41 -1.27 -0.94 0.71 0.92 -0.14 0.61 0.3 -2.23 0.46 -1.3 -0.37 0.86 0.3 -0.12 -0.26 0.13 -0.46 0.04 0.44 -0.5
Bra009068 (PROPEP5)
 0.35 0.5 0.28 -2.02 1.43 0.32 -0.77 -0.51 -0.07 -0.58 0.26 -0.63 -0.67 0.75 0.93 -0.65 -0.08 0.93 -1.71 0.36 -0.47 -0.68 -0.39 -0.51 -0.11 -0.27 -0.12 -0.17 -0.31 -0.76 0.09
-0.11 0.31 0.24 -0.51 0.41 0.2 -0.43 -0.21 -0.12 0.02 -0.15 -0.12 0.34 0.6 0.33 -0.17 0.1 0.37 -0.22 -0.11 -0.21 -0.23 -0.24 -0.09 0.01 -0.36 -0.18 -0.03 -0.01 -0.17 0.0

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.