Heatmap: Cluster_452 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
Bra002874 (NMNAT)
-0.0 -0.65 -0.49 -0.85 0.73 0.37 -0.57 -0.96 0.11 -0.41 -0.38 -0.5 -0.62 0.91 0.5 0.21 -0.54 -0.63 -0.45 -0.13 -0.36 -0.61 0.53 0.33 0.2 -0.03 0.24 0.45 0.5 0.2 0.28
Bra022101 (CKB1)
-0.15 -0.21 -0.39 -0.9 0.63 0.54 -0.65 -0.45 -0.21 -0.62 -0.29 -0.5 -0.26 0.97 0.69 -0.12 -0.47 -0.39 -0.23 -0.02 -0.43 -0.17 0.41 0.13 0.12 -0.03 0.13 0.42 0.35 0.03 0.05

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.