Heatmap: Cluster_931 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
Bra014527 (MPK10)
0.38 2.73 2.15 0.85 -8.87 -1.87 -1.97 -3.23 -1.43 -0.18 -1.63 -4.96 -7.01 -3.0 -1.99 -3.37 -2.52 -3.82 -2.41 -2.75 -3.73 -1.62 -4.0 0.14 0.66 -0.12 0.64 0.03 0.97 0.83 1.65
Bra014528 (MPK10)
0.57 2.26 2.05 1.06 -2.02 -1.94 -1.99 -1.48 -1.1 -0.79 -1.34 -1.33 -1.4 -2.15 -2.69 -2.01 -0.94 -2.67 -0.52 -0.38 -1.94 -1.82 -2.21 -0.44 0.47 0.05 -0.19 0.17 1.06 0.7 1.48

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.