Heatmap: Cluster_843 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
Bra001591 (PFU1)
0.17 - 1.23 0.03 -3.82 -0.32 -0.96 1.37 1.41 -0.97 1.31 1.08 1.59 -0.86 -0.98 -3.73 -0.29 0.81 1.0 -0.11 1.07 -0.26 -0.94 - - 0.4 -3.82 -3.63 - -3.87 -2.83
- -0.53 0.41 1.09 - 0.69 0.57 -0.62 1.59 1.42 -1.05 - 1.37 -0.53 - - -0.75 0.38 0.91 0.23 -0.82 - 0.77 0.05 - - 1.12 0.46 0.36 -0.82 -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.