Heatmap: Cluster_352 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
Bra014541 (UTR6)
-0.08 -0.39 -0.54 -1.69 0.99 1.08 -0.71 -1.26 0.23 0.16 0.18 0.16 -0.47 1.19 1.37 0.39 -0.1 0.85 0.64 0.19 -1.08 -0.99 0.14 -1.36 -1.08 -2.01 -0.37 -1.56 -0.95 -0.72 -0.23
Bra022453 (DUF179)
0.06 -0.19 -0.18 -0.33 0.13 0.52 -0.4 -0.27 0.12 0.04 -0.24 -0.24 -0.35 0.64 0.76 0.41 -0.09 0.58 0.39 -0.01 -0.42 -0.18 -0.4 -0.18 -0.27 -0.37 -0.22 -0.18 -0.11 -0.19 -0.06

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.