Heatmap: Cluster_302 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
Bra004881 (ASG3)
-0.53 -0.22 0.6 0.23 0.69 0.53 -0.08 -0.34 -1.07 -0.43 -0.14 -0.15 0.19 0.38 -0.05 0.11 -0.47 0.56 -0.04 0.24 -1.02 0.06 0.93 -0.34 -0.17 -0.42 -0.67 0.14 -0.32 -0.44 -0.09
0.5 1.79 1.39 1.1 -0.85 1.74 -1.08 - - - 0.76 - -0.58 1.64 -0.58 - 0.86 1.65 1.14 0.29 - - - - 0.18 -0.45 - - -0.74 - -
-1.11 0.37 0.12 0.22 -0.42 -0.34 0.3 -0.83 0.32 0.23 0.28 0.21 0.59 0.45 -0.28 0.48 0.59 0.88 0.19 -0.38 -1.11 -0.39 -0.81 -0.32 0.26 0.27 -0.11 -0.4 -0.65 -0.16 -1.68
Bra035436 (ASG3)
0.38 0.18 1.13 1.31 -0.16 1.8 0.61 0.53 - -0.66 -0.69 0.25 -0.09 1.36 -0.37 -0.59 -0.38 1.16 0.51 1.09 - 1.38 - - - - - - - - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.