Heatmap: Cluster_488 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
Bra010858 (ARAB-1)
0.53 0.22 0.4 0.57 0.72 0.66 0.05 -0.83 0.2 0.1 0.2 0.22 -0.49 -0.22 0.25 0.66 0.5 0.17 0.36 0.29 -0.09 0.34 -1.75 -0.84 -0.72 -1.11 -0.68 -1.26 -0.88 -1.14 -0.57
Bra029377 (CPK12)
1.14 -0.02 0.48 0.01 1.03 1.12 -0.07 0.2 0.25 0.44 0.43 0.6 -0.66 0.44 0.71 0.02 0.07 0.16 0.74 -0.58 -1.48 0.12 -1.92 -2.39 -1.94 -1.35 -2.25 -1.28 -1.31 -0.77 -1.46

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.