Heatmap: Cluster_800 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
Bra034238 (CYP71B36)
-1.97 -2.78 -1.22 -3.47 1.17 1.55 1.16 -0.11 0.91 0.92 1.02 0.69 -0.54 1.17 0.04 -0.6 -0.04 -2.32 1.04 0.37 1.21 -0.16 -2.04 -2.94 -2.38 -2.97 -2.36 -2.06 -1.29 -2.22 -2.3
Bra034239 (CYP71B9)
-2.08 -3.89 -2.5 -3.85 1.06 1.59 1.28 0.06 1.17 1.16 1.05 0.16 -0.28 1.25 -0.87 -0.33 0.12 -2.7 1.57 0.52 1.3 0.05 -2.1 -6.34 -5.56 -4.56 -5.11 -4.4 -4.12 -4.56 -4.38

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.