Heatmap: Cluster_782 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
Bra021490 (CYP51)
1.16 0.0 1.41 - -0.92 -1.04 -0.19 -0.5 -0.44 -2.02 -0.13 -0.66 -0.31 2.3 1.69 -1.85 -0.92 - 0.22 0.6 -0.02 -0.09 -2.01 - 1.19 -1.67 - - -1.77 -1.94 1.13
Bra040460 (NRAMP5)
1.16 0.41 0.72 -0.97 -2.63 -0.57 -0.65 -2.07 0.06 -1.41 -0.19 -0.28 -0.53 1.64 0.88 -1.88 -0.61 0.53 -1.0 -0.07 -0.93 0.52 0.79 -0.22 -0.09 -2.15 -3.73 -0.25 -2.57 0.33 1.56

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.