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Heatmap: Cluster_879 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
Bra017016 (RK3)
 0.26 1.95 1.49 0.38 0.71 0.04 0.52 0.01 -0.49 -0.02 -1.17 -1.49 0.62 1.06 -0.17 0.45 -0.84 1.16 0.67 -0.58 0.71 -0.31 -2.31 -2.77 -3.58 -3.68 -4.1 -4.37 -4.84 -3.96 -2.94
1.0 0.75 1.47 0.36 0.92 0.28 -1.46 -1.72 0.01 -3.94 0.65 -1.25 0.65 1.81 - 0.66 -1.21 2.0 1.04 0.31 0.5 -0.6 - - - - - - - - -
1.13 0.41 0.19 1.24 0.7 0.55 -1.6 -1.61 -1.05 -0.09 -0.9 -2.73 -0.29 0.24 -0.37 0.53 -0.35 1.72 1.09 -0.23 -0.28 -0.34 0.93 -2.25 -1.24 -0.31 -2.72 -0.78 -3.35 -1.35 -0.56

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.