Heatmap: Cluster_325 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
Bra000453 (PFG1)
-3.73 -2.06 -3.38 -3.39 1.11 1.03 0.19 -0.58 0.37 -1.37 -0.48 -0.46 -0.71 0.57 0.71 0.35 -0.49 1.48 0.73 -1.04 -0.97 -0.9 1.12 -0.38 0.33 -3.83 -0.14 0.46 -0.24 0.07 0.28
-1.19 -2.28 -0.89 -1.77 0.8 0.45 -0.23 -0.77 0.07 0.24 -0.47 -0.24 -0.01 0.63 0.85 0.13 -0.39 0.94 0.07 0.01 -0.33 -0.05 0.83 0.08 -0.02 -1.81 -0.36 -0.15 -0.11 0.15 0.51

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.