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Heatmap: Cluster_578 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
Bra009418 (AtIMP1b)
 0.33 0.77 1.09 0.24 -0.08 -0.31 -0.08 -0.2 -0.27 -0.33 -0.18 -0.26 0.2 -0.19 -0.47 0.05 -0.08 0.71 -0.32 -0.19 -0.17 0.08 0.28 -0.03 -0.13 -0.29 -0.09 -0.85 -0.5 -0.18 -0.27
Bra036571 (MAKR1)
 0.63 1.26 1.81 -0.0 0.89 -1.5 -1.19 -0.03 -0.23 -0.27 -0.34 -1.1 0.49 0.03 -0.37 -0.59 -2.14 1.11 -0.55 -0.55 -1.21 -2.32 0.52 0.03 -0.72 -0.01 -0.42 -0.55 -0.48 -0.23 -0.52

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.